Not always the case though, IMO. I took Tunis and kept the religious building that was there in place. My faction is Protestant, I have 0% Christianity and 100% Islam and I've never had any problems with them, I even tax them and have a university there and I've never had any problems with them.I think the level of reglious unrest is minimal, I'd have to double check though.
BUT.....
I do have a rather large garrison in the city so although everyone loves me, whos to say what will happen if I move most of my army into the near by fort or leave the city without a garrison altogether.
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