The admin notes down the starting conditions. Calculating points is easy from there. When agent actions or battles happen (things that alter points on an ad-hoc basis), the admin performs the action for the player. This will indeed slow the game down but it's the best way I can think of.
I would add more tech but in M2TW we only have war, subterfuge, religion and commerce. I can add more individual technologies to the trees themselves however.
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