Getting ready to go in to work, Hoplite, but wanted to just add -
Your problems do sound as if they are predominantly AI. I haven't encountered the quirkiness yet in my own game experiences. I would hate to think that you have to do a lot of manual programming fixes, like those mentioned above, to reign in the problem. But whatever it takes, I guess? I never use the timer myself.
I do remember that I had encountered some show stoppers when I first bought Civ IV. They had a memory leak in the first release of that game that would irritatingly throw you completely out of the game at unpredictable times. Their first major patch fixed that for the most part, but I still ran into problems in the late game occasionally when the campaign board got really busy. And I never could use huge maps. I haven't installed Civ IV on my laptop yet.
No doubt M2TW's campaign board gets very busy as the game progresses. And at the harder settings, the game designers have made it so the AI controlled factions have more freedom and can play more aggressively. So roving Popes and adventurous Byzantine armies make some sense.
Even so, it sounds like there are some definite quirks in the AI still requiring CA's attention, and my earlier suggestions may not be relevant. Hang in there.
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